COBA paper on ImageJ and CellProfiler rated #1 in Altmetrics for Best of Current Protocols 2021!
ImageJ and CellProfiler:
Complements in Open-Source Bioimage Analysis
ImageJ and CellProfiler have long been leading open-source platforms in the field of bioimage analysis. ImageJ's traditional strength is in single-image processing and investigation, while CellProfiler is designed for building large-scale, modular analysis pipelines. Although many image analysis problems can be well solved with one or the other, using these two platforms together in a single workflow can be powerful....Read the paper here.