Who We Are
Team
The Center for Open Bioimage Analysis brings together the Cimini and Carpenter laboratories at the Broad Institute and the Eliceiri laboratory at the University of Wisconsin-Madison, and in doing so brings together the two most popular open-source bioimage analysis projects, ImageJ (including ImageJ2 and FIJI) and CellProfiler.
Organizational Structure
TR&D1 (Deep Learning)
Component leads:
Beth Cimini, PI (Broad Institute)
Anne Carpenter, PI (Broad Institute)
Kevin Eliceiri, PI (U Wisc-Madison)
Andréa Papaleo
Additional team:
Nodar Gogoberidze*
Ed Evans
Curtis Rueden*
* Funded by CZI
TR&D2 (Algorithm Accessibility)
Component leads:
Beth Cimini, PI (Broad Institute)
Anne Carpenter, PI (Broad Institute)
Kevin Eliceiri, PI (U Wisc-Madison)
Mark Hiner
Additional team:
Ed Evans
Curtis Rueden*
Gabe Selzer
Nodar Gogoberidze*
Driving Biological Projects (DBPs)
Component leads:
Beth Cimini, PI (Broad Institute)
Anne Carpenter, PI (Broad Institute)
Kevin Eliceiri, PI (U Wisc-Madison)
Additional team:
Ed Evans
Suganya Sivagurunathan
Paula Llanos
Shatavisha Dasgupta
Each DBP will be assigned a DBP lead from among this team
Community Engagement
Component leads:
Beth Cimini, PI, (Broad Institute)
Anne Carpenter, PI (Broad Institute)
Kevin Eliceiri, PI (U Wisc-Madison)
Additional team:
Ed Evans
Suganya Sivagurunathan
Paula Llanos
Shatavisha Dasgupta
Esteban Miglietta
Erin Weisbart
External Advisory Committee
The External Advisory Committiee (EAC) for the Center for Open Bioimage Analysis gives input into trends and directions for the center to pursue in our technology development, driving biological projects, and community engagement.
EAC Members:
Anna Kreshuk (EMBL Heidelberg)
Maddy Parsons (King's College London)
Emma Lundberg (KTH Royal Institute of Technology, Sweden)
Kota Miura (Max Planck BioImaging and NEUBIAS)
Badri Roysam (University of Houston)
Ross Whitaker (University of Utah)
Mary Ann Wu (NIH Program Officer)
Anne Gershenson (NIH Program Officer)